Peer reviewed journal articles
2008
Li-Rong Zeng, Chan Ho Park, R.C. Venu, Julian Gough and Guo-Liang
Wang. 2008.Classification, expression pattern, and E3 ligase activity assay
of rice U-Box-containing proteins. Molecular Plant, in press.
Vega-Sánchez ME, Zeng L, Chen S, Leung H, Wang GL. 2008. SPIN1,
a K Homology Domain Protein Negatively Regulated and Ubiquitinated by the
E3 Ubiquitin Ligase SPL11, Is Involved in Flowering Time Control in Rice.
The Plant Cell, 1456-1469.
Wu C, Bordeos A, Madamba MR, Baraoidan M, Ramos M, Wang GL, Leach JE, Leung
H. 2008. Rice lesion mimic mutants with enhanced resistance to diseases. Mol
Genet Genomics. 279(6):605-19.
Malali Gowda and GL Wang. 2008. Robust-LongSAGE (RL-SAGE):
an improved LongSAGE method for high-throughput transcriptome analysis. Methods
Mol Biol. 387:25-38.
2007
Shujie Dong, Lane P. Tredway, H. David Shew, Guo-Liang Wang, Elumalai Sivamani,
Rongda Qu. 2007. Resistance of transgenic tall fescue to two major fungal
diseases. Plant Science, 173:501-509.
Rose Palumbo, Wai-Foong Hong, Jinguo Hu, Richard Craig, James Locke, Charles
Krause, David Tay and Guo-Liang Wang. 2007. Target Region Amplification Polymorphism
(TRAP) as a Tool for Detecting Genetic Variation in the Genus Pelargonium.
HortScience 42:1118-1123.
Miguel E. Vega-Sánchez, Malali Gowda and Guo-Liang Wang. 2007. Tag-based
approaches for deep transcriptome analysis in plants. Plant Sciences,
173:371-380
Venu RC, Jia Y, Gowda M, Jia MH, Jantasuriyarat C, Stahlberg E, Li H, Rhineheart
A, Boddhireddy P, Singh P, Rutger N, Kudrna D, Wing R, Nelson JC, Guo-Liang
Wang. 2007. RL-SAGE and microarray analysis of the rice transcriptome after
Rhizoctonia solani infection. Mol Genet Genomics, 278:421-431
[Pubmed]
Malali Gowda, Huameng Li, Guo-Liang Wang. 2007. Robust analysis
of 5'-transcript ends (5’-RATE): a high-throughput protocol for characterization
of sequence diversity of transcription start sites. Nature Protocols.
2(7):1622-32. [Pubmed]
Malali Gowda, R-C. Venu, Huameng Li, Chatchawan Jantasuriyarat, Songbiao
Chen, Maria Bellizzi, Vishal Pampanwar, HyeRan Kim, Ralph A. Dean, Eric Stahlberg,
Rod Wing, Cari Soderlund, Guo-Liang Wang. 2007. Magnaporthe grisea Infection
Triggers RNA Variation and Antisense Transcript Expression in Rice, Plant
Physiology, 144(1):524-33. [Pubmed]
Kan Nobuta, Venu Reddyvari-Channarayappa, Cheng Lu, André Belo, Kalyan Vemaraju,
Pam Green, Guo-Liang Wang, and Blake C. Meyers. 2007. An Expression Atlas
of Rice mRNA and Small RNA", Nature Biotechnology, 25:473-477.
[Pubmed]
Gowda M, Reddyvarichannarayappa Venu, Jia Y, Stahlberg E, Pampanwar V, Soderlund
C, GL Wang (2007). Use of RL-SAGE Analysis to Identify Novel Fungal and Plant
Genes Involved in Host-Pathogen Interactions. Methods Mol Biol;354:131-44.[Pubmed]
Liu J, Liu X, Dai L, Wang G. 2007. Recent progress in elucidating the structure,
function and evolution of disease resistance genes in plants. J Genet Genomics.
34(9):765-76.
Liangying Dai, Xionglun Liu, Yinghui Xiao, Guo-Liang Wang. 2007 Recent advances
in cloning and characterization of disease resistance genes in rice. Journal
of Integrative Plant Biology. 49 (1): 112-119.
Zhou B, M. Dolan, H. Sakai, and G.-L. Wang. 2007. The Genomic Dynamics and
Evolutionary Mechanism of the Pi2/9 Locus in Rice. Mol. Plant-Microbe
Interact., 20:63-71 [Pubmed]
Jo Y.-K., G.-L. Wang, and M. J. Boehm. 2007. Expression Analysis of Rice
Defense-Related Genes in Turfgrass in Response to Magnaporthe grisea, Phytopathology,
Phytopathology 97:170-178.
2006
Soderlund C, Haller K, Pampanwar V, Ebbole D, Farman M, Orbach MJ, Wang
G-L, Wing R, Xu JR, Brown D, Mitchell T, Dean R. 2006 MGOS: A resource
for studying Magnaporthe grisea and Oryza sativa interactions. Mol Plant Microbe
Interact. 19(10):1055-61. [PubMed]
Gowda M, RC Venu, Mohan B Raghupathy, Kan Nobuta, Huameng Li, Eric Stahlberg,
Rod Wing, Sean Coughlan, Christian D Haudenschild, Ralph Dean, Baek Hie Nahm,
Blake C Meyers and GL Wang. 2006. Deep and comparative analysis
of the mycelium and appressorium transcriptomes of Magnaporthe grisea using
MPSS, RL-SAGE, and oligoarray methods. BMC Genomics, 8;7:310. [Pubmed]
H Yan, H Ito, K Nobuta, S Ouyang, W Jin, S Tian, C Lu, RC Venu, GL
Wang, PJ Green, RA Wing, CR Buell, BC Meyers, and J Jiang. (2006).
Genomic and genetic characterization of rice Cen3 reveals extensive transcription
and evolutionary implications of a complex centromere. Plant Cell 18(9):2123-33
[PubMed]
M Gowda, H Li, J Alessi, F Chen, R Pratt, GL Wang (2006).
Robust Analysis of 5'-Transcript Ends (5'-RATE): A novel technique for
transcriptome analysis and genome annotation. Nucleic acids research. 34(19):e126.
[PubMed]
B Zhou, Q Qu, G Liu, M Dolan, H Sakai, G Lu, M Bellizzi, GL Wang
(2006). The eight amino acid differences within three leucine-rich repeats
between Pi2 and Piz-t resistance proteins determine the resistance specificity
to Magnaporthe grisea, Mol. Plant-Microbe Interact.19(11):1216-28.
[PubMed]
S Chen, L Tao, L-R Zeng, M Vega-Sanchez and GL Wang.
(2006). Protoplast-based transient assay system for gene expression and protein-protein
interaction study in rice. Mol Plant Pathol 7(5). [Link]
L-R Zeng, M Vega-Sánchez, T Zhu. and GL.Wang. (2006)
Ubiquitination-mediated protein degradation and modification: an emerging
theme in plant-microbe interactions. Cell Research 16: 413-426 [PubMed]
Hak-Seung Ryu, Muho Han, Sang-Kyu Lee, Jung-Il Cho, Nayeon Ryoo, Sunggi Heu,
Youn-Hyung Lee, Seong Hee Bhoo, Tae-Ryong Hahn, GL Wang,
Jong-Seong Jeon. (2006). A comprehensive expression analysis of WRKY gene
superfamily in rice plants during defense response. Plant Cell Reporter.25(8):836-47.
[PubMed]
Qu SH, Liu GF, Zhou B, Bellizzi M, Zeng LR, Dai LY, Han H and Wang
GL. 2006. The Broad-Spectrum Blast Resistance Gene Pi9 Encodes an
NBS-LRR Protein and is a Member of a Multigene Family in Rice. Genetics 172:
1901-1914. [PubMed]
2005
Wu JL, Wu C, Lei C, Baraoidan M, Bordeos A, Madamba MR, Ramos-Pamplona M,
Mauleon R, Portugal A, Ulat VJ, Bruskiewich R, Wang GL, Leach
J, Khush G, Leung H. (2005) Chemical- and Irradiation-induced Mutants of Indica
Rice IR64 for Forward and Reverse Genetics. Plant Mol Biol.
2005 59(1):85-97. [PubMed]
Wang, ZL, Dai, L, Jiang, Z, Peng, W, Zhang, L, Wang,
GL, Xie, D. (2005) GmCOI1, a soybean F-box protein gene, shows
ability to mediate jasmonate-regulated plant defense and fertility in Arabidopsis.
Mol Plant-Microbe Interact, 18:1285-1295. [PubMed]
Gu K, Yang B, Tian D, Wu L, Wang D, Sreekala C, Yang F, Chu Z, Wang GL,
White F, Yin Z. (2005) Type III effector-induced R gene expression triggers
disease resistance in rice. nature, 435:1122-1125. [PubMed]
Jantasuriyarat C, Gowda M, Haller K, Hatfield J, Lu G, Stahlberg S, Zhou
B, Li H, Kim HR, Yu YS, Dean RA, Wing RA, Soderlund C and GL Wang (2005).
Large-scale identification of ESTs involved in rice and rice blast (Magnaporthe
grisea) interaction. Plant Physiology, 138: 105-15 [PubMed]
2004
Yi G, Lee SK, Hong YK, Cho YC, Nam MH, Kim SC, Han SS, Wang GL, Hahn
TR, Ronald PC, Jeon JS. (2004) Use of Pi5(t) markers in marker-assisted selection
to screen for cultivars with resistance to Magnaporthe grisea. Theor Appl
Genet. 109(5):978-85. [PubMed]
Zeng L-R, Qu S, Bordeos A, Yang C, Baraoidan M, Yan H, Xie Q, Nahm BH, Leung
H, and Wang GL (2004) Spotted leafl11, a Negative
Regulator of Plant Cell Death and Defense, Encodes a U-Box/Armadillo Repeat
Protein Endowed with E3 Ubiquitin Ligase Activity.Plant Cell 16(10):
2795-2808 [PubMed]
Wang GL , Wu C, Zeng L, He C, Baraoidan M, William CE, Ronald
P, Leung H (2004) Isolation and characterization of rice mutants compromised
in the Xa21-mediated resistance to Xamthomonas oryzae pv oryzae
. Theoretical and Applied Genetics, 108:379-84. [PubMed]
Gowda M, Jantasuriyarat C, Dean R., Wang GL (2004) A robust-longSAGE
method for large-scale gene discovery and transcriptome profiling. Plant Physiology,
134:890-7. [PubMed]
Lu G, Jantasuriyarat C, Zhou B, Wang GL (2004). Isolation
and characterization of novel defense response genes involved in compatible
and incompatible interactions between rice and Magnaporthe grisea .
Theoretical and Applied Genetics, 108:525-34. [PubMed]
2003
Gu K, Tian D, Yang F, Wu L, Chellamma S, Wang D, Wang GL
, Yin Z (2003) . High-resolution genetic mapping of Xa27(t), a new bacterial
blight resistance gene in rice, Oryza sativa L. Theoretical and Applied
Genetics, Theoretical and Applied Genetics, 108(5):800-7. [PubMed]
Qu S, Coaker G, Francis D, Zhou B, Wang GL (2003) Development
of a new transformation-competent artificial chromosome (TAC) vector and construction
of tomato and rice TAC libraries. Molecular Breeding, 12:297-308 .
[Journal Link]
Jeon JS, Chen D, Yi GH, Wang GL , Ronald PC (2003) . Genetic
and physical mapping of Pi5(t) , a locus associated with broad-spectrum
resistance to rice blast. Molecular Genetics and Genomics , 269(2):280-289
. [PubMed]
2002
Zeng L, Yin Z, Chen J, Leung H, Wang GL (2002) Fine
genetic mapping and physical delimitation of the lesion mimic gene Spl11 to
a 160 kb DNA segment of the rice genome. Molecular Genetics and Genomics 268:253-261.
[PubMed]
Liu G, Lu G, Zeng L, Wang GL (2002) The two broad-spectrum
blast resistance genes, Pi9(t) and Pi2(t) , are physically
linked on rice chromosome 6. Molecular Genetics and Genomics 267:472-480.
[PubMed]
Zhai WX, Wang WM, Zhou YL, Li XB, Zheng XW, Zhang Q, Wang GL
, Zhu LH. (2002) Breeding bacterial blight resistant hybrid rice
with the cloned bacterial resistance gene Xa21 . Molecular Breeding
8:285-293. [Journal
Link]
2001
Wang Z, Taramino G, Yang D, Tingey SV, Miao GH, Wang GL (2001) Rice ESTs
with disease resistance gene- or defense response gene-like sequences mapped
to regions containing major resistance genes or QTLs. Molecular Genetics
and Genomics 265:302-310. [PubMed]
Yin Z, Chen J, Zeng L, Goh G, Leung H, Khush GS, Wang GL (2000)
Characterization of rice lesion mimic mutants and identification of a mutant
with broad-spectrum resistance to rice blast and bacterial blight.
Molecular Plant-Microbe Interactions 13:869-876. [PubMed]
He C, Fong S, Yang D, Wang GL (1999) BWMK1, a novel MAP
kinase induced by fungal infection and mechanical wounding in rice.
Molecular Plant-Microbe Interactions 12:1064-1073. [PubMed]
Yin Z, Wang GL (2000) Evidence of Multiple Complex Patterns
of T-DNA Integration into the Rice Genome. Theoretical and Applied
Genetics 99:461-470. [Journal
Link]
Dong F, Miller J, Jackson SA, Wang GL , Ronald PC, Jiang
J (1998) Rice (Oryza sativa) centromeric regions consist of complex DNA.
Proc. Natl. Acad. Sci. USA 95:8135-8140. [PubMed]
Wang GL , Ruan DL, Song WY, Sideris S, Chen L, Pi L, Whalen
MC, Zhang S, Fauquet C, Ronald PC (1998) The rice disease resistance gene,
Xa21D, encodes a receptor-like molecule with a LRR domain that determines
race specific recognition and is subject to adaptive evolution. The
Plant Cell 10:765-780. [PubMed]
Song WY, Pi LY, Wang GL, Gardner J, Holsten T, Ronald PC
(1997) Evolution of the rice Xa21 disease resistance gene family. The
Plant Cell 9:1279-1287. [PubMed]
Yang DC, Parco A, Nandi S, Subudhi P, Zhu Y, Wang GL, Huang
N (1997) Construction of a bacterial artificial chromosome (BAC) library and
identification of overlapping BAC clones with chromosome 4 specific RFLP markers
in rice. Theoretical and Applied Genetics 95:1147-1154. [Journal
Link]
Wang GL , Song W, Ruan D, Sideris S, Ronald PC (1996) The
cloned gene, Xa21 , confers resistance to multiple Xanthomonas
oryzae pv. oryzae isolates in transgenic plants. Molecular
Plant-Microbe Interactions 9:850-855. [PubMed]
Wang GL , Warren R, Innes R, Osborne B, Baker B, Ronald
PC (1996) Construction of an Arabidopsis bacterial artificial chromosome
library and isolation of clones hybridizing with disease resistance gene-like
sequences. Plant Molecular Biology Reporter 14:107-114.
Song WY, Wang GL , Chen L, Kim HS, Holsten T, Wang B, Zhai
W, Zhu LH, Fauquet C, Ronald PC (1995) The rice disease resistance gene, Xa-21
, encodes a receptor kinase-like protein. Science 270:1804-1806.[PubMed]
Chen D, Wang GL, Ronald RC (1997) Location of the rice
blast resistance locus Pi5(t) in Moroberekan by AFLP bulk analysis.
Rice Genetics Newsletter 14:95-97.
Wang GL , Song WY, Chen LL, Ruan R, Sideris S, Ronald PC
(1996) Resistance spectrum, race specificity, and expression of the Xa21 family.
International Rice Research Notes 21:45-46.
Wang GL, Holsten TE, Song WS, Wang HP, Ronald PC (1995)
Rice bacterial artificial chromosomes in genome analysis. Rice Biotechnology
Quarterly 23:1-2.
Jiang J, Gill BS, Wang GL , Ronald PC, Ward DC (1995) Interphase
and metaphase mapping of rice genome using bacterial artificial chromosomes.
Proc. Natl. Acad. Sci. USA 92:4487-4491.
Wang GL, Dong JM, Paterson AH (1995) The distribution of
Gossypium hirsutum chromatin in G. barbadense cultivars:
molecular analysis of introgressive plant breeding . Theoretical
and Applied Genetics 91:1153-1161.
Wang GL, Holsten TE, Song WY, Wang HP, Ronald PC (1995)
Construction of a rice bacterial artificial chromosome library and identification
of clones linked to the Xa-21 disease resistance locus. The
Plant Journal 7:525-533.
Champoux MC, Wang GL , Sarkarung S, Mackill DJ, O'Toole
JC, Huang N, McCouch SR (1995) Locating genes associated with root morphology
and drought avoidance in rice via linkage to molecular markers. Theoretical
and Applied Genetics 90:969-981.
Wang GL, Paterson A (1994) Assessment of DNA pooling strategies
in mapping QTLs. Theoretical and Applied Genetics 88:355-361.
Wang GL , Mackill DJ, Bonman JM, McCouch SR, Nelson R (1994)
RFLP mapping of genes conferring complete and partial resistance to blast
in a durably resistant rice cultivar . Genetics 136:1421-1434.
Wang GL , Wing RA, Paterson AH (1993) PCR amplification
from single seeds, facilitating marker-based selection. Nucleic Acid
Research 21:2527.
Chapters in Edited Books
Shoshi. Kikuchi, Guo-Liang Wang and Lei Li.
(2007). Genome-wide RNA expression profiling. In Rice Functional Genomics-
Challenges, Progress and Prospects. Ed. N.M. Upadhyaya. Springer, NY, in
press
Gowda M, Reddyvarichannarayappa Venu, Jia Y, Stahlberg E, Pampanwar V, Soderlund
C, GL Wang (2005). Use of RL-SAGE Analysis to Identify Novel
Fungal and Plant Genes Involved in Host-Pathogen Interactions. In: Ronald
PC (ed) "Methods in Molecular Biology:Plant-Pathogen Interactions".
Humana Press. (In Press)
Malali Gowda and GL Wang (2005) Robust-LongSAGE (RL-SAGE):
an improved LongSAGE method for high-throughput transcriptome analysis. In:
Kåre Lehmann Nielsen (ed) "Methods in Molecular Biology-SAGE”.
Humana Press. (In Press)
Wang GL, Liu G, Qu S, Zhou B, Zeng L (2004) Broad-spectrum
resistance genes Pi2(t) and Pi9(t) are clustered on chromosome
6. In: Kawasaki S (ed) Advance in Rice Blast Research III. . Kluwer Publisher,
In press.
Wang GL, Xu JR (2004) Rice Blast ( Magnaporthe grisea
). In: Goodman RM (ed) The Encyclopedia of Plant and Crop Science. Marcel
Dekker, Inc, In press.
Wang GL , Leung H, Ronald PC (2001) Structure, function,
and evolution of disease resistance genes in rice. In: Khush GS, Brar DS,
Hardy B (eds) Rice Genetics IV. Science Publishers, Inc. pp 335-344.
Leung H, Wu C, Baraoidan M, Bordeos A, Ramos M, Madamba S, Cabauatan P, Vera
Cruz C, Portugal A, Reyes G, Bruskiewich R, McLaren G, Lafitte R, Gregorio
G, Bennett J, Brar D, Khush GS, Schnable P, Wang GL , Leach
J (2001) Deletion mutants for functional Genomics: Progress in phenotyping,
sequence assignment, and database development. In: Khush GS, Brar DS,
Hardy B (eds) Rice Genetics IV. Science Publishers, Inc. pp 239-252.
Leach JE, Leung H, Wang GL (2001) Dissection of defense
response pathways in rice. In: Novartis Foundation Symposium (ed) Rice
Biotechnology: Improving yield, stress tolerance and grain quality.
John Wiley & Sons, Ltd, pp 190-204.
Wang GL , He CZ, Wu CJ, Yin ZC, Baraoidan M, Zeng LR, Ronald
PC, Khush GS, Leung H (2000) Genetic dissection of disease resistance pathways
in rice. In: Lebrun MH, Notteghem JL, Talbot NJ, Tharreau
D (eds) Advances in Rice Blast Research. Kluwer Publisher.
Wang GL , Leung H (1998) Molecular biology of host-pathogen
interactions in rice diseases. In: Shimamoto K (ed) Molecular
Biology of Rice. Springer-Verlag, Tokyo, Japan, pp 201-232.
Ronald PC, Holsten T, Scambray J, Song WY, Wang GL, Williams
C (1995) Molecular genetic analysis of the rice bacterial blight resistance
locus Xa21. In: Tsunewaki K (ed) Plant Genome and Plastome
. Kodansha Scientific Ltd, Tokyo, Japan, pp 95-100
Ronald PC, Holsten T, Scambray J, Song WY, Wang GL, Williams
C (1994) Molecular genetic analysis of the rice bacterial blight resistance
locus, Xa-21. In: Zeigler RS, Leong SA, Teng PS (eds) Rice Blast Disease.
CAB International, pp 187-194.
Wang GL , Mackill DJ, Bonman JM, McCouch SR, Nelson R (1993)
RFLP mapping of genes conferring complete and partial resistance in a rice
cultivar with durable resistance to blast. In: Jacobs TH, Parleviet
JE (eds) Durability of disease resistance. Kluwer Academic Publishers, pp
209-215.
Patents
